is there really an advantage to have native Linux support nowadays?
Yes, performance and consistency.
As a dev, you honestly are asking the wrong question. You shouldn't pride yourself on the corners you're cutting; you should be using them as an opportunity to expand your knowledge and skillset.
You're adding to the pile of developer trash every time you rely on abstraction layers to do your job for you. You're reinforcing an atmosphere where windows developers can get locked-in as much as they want, and it's up to the Linux community to pick up their (your) slack.
In all honesty, I don't have high hopes for your game and you really should consider what I'm saying before you release more trash into the world.